Distribution of the 68 <i>R</i>. <i>felis</i> pRF plasmid ORFs within the OGs predicted by OrthoMCL^A.

AResults include 44 predicted ORFs from the putative smaller R. felis plasmid, pRFδ (see Gillespie et al., 2007). BFollows Gillespie et al. (2007). Additional annotation is listed below in footnotes G-Z. CBlank values depict R. felis singletons. DBold OGs depict singletons upon the removal of doubtful orthologs from pRFδ. Italicized OGs Blast to chromosomal proteins on the R. felis chromosome. EUnderlined OGs contain more than one pRF ORF. FRepresentative (R) or non-representative (N) family. Groups containing ORFs from pRFδ are noted with an asterisk. GHP. HType I restriction enzyme EcoEI M protein. ICHP. JThe pRFδ protein in PATRIC, VBI0166RF3_0019, is slightly different than the pRF protein. KConjugal transfer protein TraA. LPutative transposase. MDNA polymerase III polC-type NTransposase for insertion sequence element IS1328. OR46 site-specific recombinase, Transposon Tn917 resolvase. PISBma2, transposase. QTransposon Tn917 resolvase, R46 site-specific recombinase. RThe pRFδ protein in PATRIC, VBI0166RF3_0020, is slightly different than the pRF protein. SProbable transposase for transposon Tn903. TCOG1396: Predicted transcriptional regulators. UCOG3706: Response regulator containing a CheY-like receiver domain and a GGDEF domain. VProtein virD4. WSpore protein SP21. XProbable transposase for insertion sequence element. YCell division cycle protein 27 homolog. ZMyosin-11 (R. prowazekii), M protein, serotype 2.1 precursor (R. typhi).