Transcriptomic analysis of regulatory gene expression profiles by EIJ1 under Pst D3000 treatments. Transcriptomic analysis of regulatory gene expression profiles by EIJ1 under Pst D3000 treatments

To understand how the EIJ1 complex functions in plant innate immunity, a genome-wide transcriptomic analysis was carried out using 3-week-old of eij1-1 and Col plants under dip inoculated with Pst DC3000 (OD600 = 0.1) treatment. Basing on the criteria of 2-fold cutoff for the genes with 5% false discovery rate, we first identified the differentially expressed genes in eij1_P vs Col_P, which are referred to stress response and innate immune response. These data suggest that EIJ1 may be involved in plant immune response. Overall design: Three-week-old of eij1-1 and Col plants were dip inoculated with Pst DC3000 (OD600 = 0.1). The treated leaves were collected at 24 hpi. RNA sequencing was performed by the Biomarker Technologies Corporation (Beijing, China) using an Illumina NovaSeq platform.