tNGS in patients with pulmonary infection (PRJCA028247)
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tNGS in patients with pulmonary infection
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2025-11-18
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Analysis of positive blood culture samples by real-time PCR.
Note: the positive blood culture samples containing P. aeruginosa are not included in Table 4. a: ß-lactamase: blaCTX-M-1/blaCTX-M-9 ESBLs or blaCMY-2/blaDHA-1 pAmpC gene. b: Eco, Escherichia coli; Kp
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Additional file 1: of Comparing the yield of oropharyngeal swabs and sputum for detection of 11 common pathogens in hospitalized children with lower respiratory tract infection
List of target pathogens. (XLSX 13 kb)
Figshare2019-06-24 更新10
Enterococcus faecalis DENG1 Genome sequencing. Enterococcus faecalis DENG1
Linezolid is an important antibiotic to treat the enterococcus infection, however, the characteristic of complete genome of linezolid-resistant enterococcus fecalis is rarely reported. Thus this repor
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SHOME-BIO (SHOtgun MEtagenomic analysis of BIOlogical entities): from reads to pathogens. A specific and exhaustive pipeline for handling metagenomic shotgun sequencing data.. SHOME-BIO (SHOtgun MEtagenomic analysis of BIOlogical entities): from reads to pathogens. A specific and exhaustive pipeline for handling metagenomic shotgun sequencing data.
Next-Generation-Sequencing (NGS) technologies have led to important improvement in the detection of new or unrecognized infective agents, related to infectious diseases. In this context, NGS high-thro
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Staphylococcus aureus strain:0831 Genome sequencing. Staphylococcus aureus strain:0831
Clinical isolate of methicillin resistant Staphylococcus aureus obtained from cystic fibrosis in-patient sputum sample at the University of Alabama at Birmingham
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