human_gastric_Tumor_patient1.zip

Whole-slide Xenium spatial transcriptomics (ST) data from a human gastric tumor sample generated by 10x Genomics which was used for benchmarking. Additionally, 5 pseudo-Visium daughter captures, derived from the whole-slide sample, were generated to simulate low-resolution and limited capture-size scenarios. The daughter regions were computationally generated from the whole-slide Data usage was conducted under IRB approval (IRB No. 30-2023-1).

本数据集包含由10x Genomics生成的人类胃癌组织样本全片Xenium空间转录组（spatial transcriptomics, ST）数据，该数据集曾用于基准测试。此外，我们基于该全片样本通过计算生成了5份类Visium子代捕获数据，用以模拟低分辨率、捕获范围受限的实验场景。所有子代捕获区域均通过计算手段从全片样本中生成。本数据集的使用已获得伦理审查委员会（Institutional Review Board, IRB）批准，伦理编号为30-2023-1。

搜集汇总

背景与挑战

背景概述

该数据集包含来自人类胃肿瘤样本的10x Genomics全切片Xenium空间转录组学数据，用于基准测试，并包含5个计算生成的模拟低分辨率子区域数据。数据使用遵循CC BY 4.0许可，并获得IRB批准。