Taxonomic designation of features

Dryad2019-01-01 更新2026-04-13 收录

数据链接：

https://datadryad.org/resource/doi:10.5061/dryad.45ct519/4 数据链接链接失效反馈

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资源简介：

Taxonomic designation of features listed in the features table. Designations were made in QIIME 2 (v. 2017.10) using the SILVA 128 database.

创建时间：

2019-01-01

MetaFunc Databases: Kaiju database

基因组学分析

微生物组分类

MetaFunc is a computational pipeline that can take input reads and pass it through a pipeline that will then analyse host genes from the reads on one side, and microbiome taxonomies and gene ontology

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Relative taxonomic composition (in percentages) of microbiota samples at different taxonomic ranks, according to their intestinal segment of origin.

消化道微生物组

微生物组分类

Relative taxonomic composition (in percentages) of microbiota samples at different taxonomic ranks, according to their intestinal segment of origin.

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An updated evolutionary history and taxonomy of Mycobacterium tuberculosis lineage 5, also called M. africanum

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微生物组分类

This study using both newly sequenced genomes and available public genomes allows to describe new L5 sublineages. We report that the MTBC L5 tree is made-up of at least 12 sublineages from which 6 are

NIAID Data Ecosystem40

Additional file 8: Table S6. of Comprehensive benchmarking and ensemble approaches for metagenomic classifiers

微生物组分类

基因组测序

The read counts and relative abundances for Bacillus anthracis identified by various tools after the whole genome sequencing of two samples from the New York City subway system. (XLSX 13 kb)

DataCite Commons2024-12-18 更新90

Predictive performance of models trained to predict the presence of Methanobacteriaceae from metagenomes.

基因组学预测模型

微生物组分类

Samples: Models trained on CV sets from all samples (n = 2203 samples in total, train = 1542 and test = 661 samples), or only the set of samples with complete metadata information for age, gender, and

NIAID Data Ecosystem50

Taxonomic designation of features

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