RB-TnSeq data for Phocaeicola vulgatus CL09T03C04 and 8 carbon sources

This data set includes randomly-barcoded transposon sequencing data (RB-TnSeq) for Phocaeicola vulgatus CL09T03C04 growing in a defined medium with eight different carbon sources. The data can also be viewed interactively at the Fitness Browser. The files included are:organism_Bvulgatus_CL09T03C04_genes.tab -- the table of genespool.n10 -- the transposon insertions and their barcode sequencesBvulgatus_CL09T03C04_ML5_set1.poolcount -- a table of counts per barcode in each sample. (The Time0 samples are indexes IT001, IT002, IT087, and IT088)exp_organism_Bvulgatus_CL09T03C04.txt -- metadata and quality scores for each experimentdb.StrainFitness.Bvulgatus_CL09T03C04 -- fitness values for each strainfit_organism_Bvulgatus_CL09T03C04.tsv -- fitness values for each genet_organism_Bvulgatus_CL09T03C04.tsv -- the corresponding t scores (a t-like test statistic)For an explanation of RB-TnSeq and the fitness values and t scores, see Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded TransposonsFor an explanation of the quality scores for the experiments, see here (scroll down to Documentation)