Supplementary Data S2 - DESeq2 result tables of all datasets analyzed

Supplementary Data S2 of the manuscript "<b>Hypoxia leads to reduced mito-nuclear gene expression and to increased mtDNA transcriptional pausing in human cells</b>" by Shtolz et al.DESeq2 "result" output. Main columns:<b>Name:</b> gene symbol<b>baseMean</b>: Mean normalized expression across all samples<b>log2FoldChange</b>: log₂ fold-change between treatment (hypoxia) and control (normoxia).<b>lfcSE</b>: Standard error of the log₂fold-change<b>stat</b>: Negative binomial test statistic.<b>p-value</b><b>padj:</b> Benjamin-Hodgkin-adjusted p-value<b>dataset</b>: Name of the dataset<b>cell line</b><b>Complex</b>: Complex association of gene (either complex I, II, III, IV and V of OXPHOS or the mito-ribosome)<b>Genome</b>: Genome of the gene (NUC for nucleus or MT for mitochondrial DNA).<b>ensembl.gene</b>: Ensemble gene ID.Data used to generate Figures 1, 2, 3a-c, 4a, 4b and 4e, and Supplementary Figures S1, S2, S5, S6 and S7.