BEP clade of the grass family (Poaceae) is composed of three subfamilies, i.e. Bambusoideae, Ehrhartoideae, and Pooideae. Controversies on the phylogenetic relationships among three subfamilies still
Positive selected sites were identified using empirical Bayes procedure. Sites inferred under selection at the 99% level are listed in bold, and those at the 95% level are in italics, the putative PBR
lnL: log likelihood scores; -2ΔlnL: likelihood ratio test (LRT) to detect positive selection. PAML branch-sie model A analysis to identify branches under episodic positive selection.
Supplementary Table S1: Matrix of genotypes defined within each of the genes Supplementary Table S2: Lineages in gene trees under significant positive selection. The table is a summary o
Sequenced transcriptome of many shark species to find orthologous genes. Aimed to identify signatures of positive selection in genes of particular lineages.