Genomic inferences in a thermophilous grasshopper provide insights into the biogeographic connections between northern African and southern European arid-dwelling faunas
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https://figshare.com/articles/dataset/Pleistocene_climatic_and_eustatic_fluctuations_explain_the_diversification_and_biogeographic_connections_of_African_and_southern_European_arid-dwelling_faunas/14706057
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Samples.xlsx: Description of individual and population codes used in the different analyses and genomic datasets. Dericorys_c85d5m18sh15_10000SNPs.str: Input file (10,000 random SNPs) used to perform genetic clustering analyses (STRUCTURE) including all populations of Dericorys millierei and D. carthagonovae. Carthagonovae_c85d5m7sh15_10000SNPs.str: Input file (10,000 random SNPs) used to perform genetic clustering analyses (STRUCTURE) for populations of Dericorys carthagonovae. Dericorys_c85d5m18sh15_ 18550SNPs.str: Input file (18,550 SNPs) used to perform principal component analyses (PCA). Dericorys_c85d5m18sh15.nex: Input file (NEXUS format) used to perform phylogenomic analyses in SNAPP. SVDQUARTETS.zip: This ZIP folder contains the genetic datasets (NEXUS format) used to perform phylogenomic analyses in SVDQUARTETS. BPP.zip: This ZIP folder contains the input files used to perform A00 and A01 analyses in BPP. PHYLONETWORKS.zip: This ZIP folder contains the input files used to perform PHYLONETWORKS analyses. Dericorys_c85d5m18sh15.treemix: Input file (TREEMIX format) used for phylogenomic analyses in TREEMIX. FASTSIMCOAL2.zip: This ZIP folder contains input files for demographic analyses in FASTSIMCOAL2. OccurrenceData.csv: Occurrence data used for environmental niche modelling (ENM).ENM_Maps.zip: This ZIP folder contains maps showing the distribution of climatically suitable habitats for Dericorys millierei and D. carthagonovae at five temporal snapshots (0 ka, 5 ka, 10 ka, 15 ka and 22 ka).
创建时间:
2021-05-31



