five

Correction for variants detected by self-alignment (Steps A and C).

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https://figshare.com/articles/dataset/_Correction_for_variants_detected_by_self_alignment_Steps_A_and_C_/422311
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aSNVs detected by Mauve whole-genome alignment of the reference Rd and 86-028NP genomes. bAlleles shared between Rd-RR and NP-NN, due to introduction of MAP7 antibiotic resistance alleles. cAlleles shared between Rd-RR and NP-NN that are variant only in the Rd reference. dAlleles shared that were originally non-ACGT bases in the Rd reference. eAlleles found only in NP-NN. fAlleles in NP-NN that are MAP7-specific. gAlleles found only in Rd-RR. hFinal set of SNVs used for cross-validation (Table 5).
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2011-07-28
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