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Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Kidney, v1.6

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DataCite Commons2025-09-11 更新2025-04-16 收录
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https://entity.api.hubmapconsortium.org/redirect/HBM699.PTNX.744
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Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) tables aim to capture the nested kidney structure of<br>anatomical human body parts, the typology of cells, and biomarkers used to identify cell types. The tables are<br>authored and reviewed by an international team of experts. The kidney ASCT+B tables are generated from a variety of<br>publicly available human kidney datasets and from data generated by HuBMAP and KPMP consortia. Most of the markers<br>listed are observed in more than one study or orthogonally validated. Note that these are predicted markers and a<br>single marker to annotate a cell type is not likely sufficient or specific. Therefore, these are just a guide; more<br>accurate annotation should be done using the entire set of enriched genes in a cluster. The cell types shown here are<br>at much higher granularity, although general markers for many of the structures are also shown. There is a tradeoff in<br>uncertainty of cell type annotation with higher granularity, and as spatial validation approaches become more robust,<br>we will be accordingly revising these.
提供机构:
HuBMAP
创建时间:
2024-12-17
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