Simulated Tomograms used for TomoTwin
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Simulated Training Tomograms for the TomoTwin particle picking procedure. It contains 8 sets: 7 simulation named tomo_simulation_round_X and 1 generalization tomogram named tomo_simulation_gen. The folder structure is as follows: files_filament: PDB and configuration file for adding actin filaments to the tomogram pdbs: Particle PDBs used for simulation. tomo_NUMBER_TIMESTAMP: Tomogram folders. Each folder contains tiltseries_rec.mrc: The reconstruction coords: .coord files with coordinates of the individual proteins. All tomograms where simulated using the TEM-Simulator-Scripts. The command looked like this: tsimscripts_pipe.sh --pdbs pdbs/*.pdb --npdbs 150 --output out/tomo_01/ --pdbs_fil files_filament/*.pdb --settings_fil files_filament/*.json --nsubs 100



