Additional file 2 of Metagenomic insights into microbial adaptation to the salinity gradient of a typical short residence-time estuary

Additional file 2: Supplementary Table S1. Physicochemical parameters and metagenomic data sizes. Supplementary Table S2. Shotgun metagenomics sequencing statistics and COG annotation for metagenomes. Supplementary Table S3. Characteristics of the 127 MAGs reconstructed in this study. Supplementary Table S4. Raw relative abundances of 127 MAGs reconstructed in this study and their taxonomy and salinity categories. Supplementary Table S5. Proportion of sequences recruited by the MAGs from each metagenomic sample and the co-assembly. Supplementary Table S6. Taxonomic annotation results based on metagenomic contigs and Shannon-Wiener diversity indices. Supplementary Table S7. Statistics of ribosomal gene sequences identified and annotated from the metagenomes. Supplementary Table S8. COG functions that significantly segregated across MAGs of different salinity categories selected by the Boruta random forest algorithm based on 8000 permutations. Supplementary Table S9. Relative abundances of COGs (%) related to microbial adaptation to the estuarine environment in the metagenomes. Supplementary Table S10. Relative abundances of COGs (%) related to microbial adaptation to the estuarine environment in the MAGs.