Additional file 2 of Comprehensive characterization of ubiquitinome of human colorectal cancer and identification of potential survival-related ubiquitination

Additional file 2. Table S1. Ubiquitination annotation. Table S2. Protein annotation. Table S3. 42 proteins having ten or more than ten ubiquitination modifications. Table S4. 20 ubiquitin-binding motifs. Table S5. 2242 proteins with an upregulated ubiquitination and 1204 proteins with a down-regulated ubiquitination. Table S6. 1172 up-regulated proteins and 1700 down-regulated proteins. Table S7. 646 Secretory proteins. Table S8. 53 proteins having an upregulated expression simultaneously with a down-regulated ubiquitination and 116 proteins having down-regulated expression simultaneously with an up-regulated ubiquitination. Table S9. 7 proteins having an up-regulated expression simultaneously with a down-regulated ubiquitination. Table S10. 52 proteins having a down-regulated expression simultaneously with an up-regulated ubiquitination. Table S11. 101 proteins which were probably associated with the overall survival rates of CRC patients.