Datasets for "BCTI: A Bayesian network-based method for revealing critical transitions in complex biological systems"

This repository contains the datasets used in the manuscript"BCTI: A Bayesian Network Inference Method for Quantitatively and QualitativelyQuantifying Critical Transitions of Complex Biological Systems". TCGA datasets:- COAD, LUAD, and THCA gene expression datasets used in this study.- The original data are publicly available from the UCSC Xena platform. Single-cell dataset:- Human embryonic lung development single-cell RNA-seq dataset used in this study.- The original data are available in the Gene Expression Omnibus (GEO) under accession code GSE215895. Benchmark datasets:- dream4: DREAM network dataset.- IRMA: IRMA synthetic yeast gene regulatory network dataset.- SOS: E. coli SOS repair network dataset. The benchmark datasets are publicly available from their original publicationsand are included here to facilitate reproducibility of the analyses.