Genome map of low-complexity regions, simple sequence repeats (SSRs), and putative open reading frames (ORFs) in the chromosome-level assembly YMM1 of yerba mate (Ilex paraguariensis)

This dataset comprises genome annotation files (GFF format) detailing various features identified on the chromosome-level assembly YMM1 of yerba mate (Ilex paraguariensis). These annotations were generated by applying the following tools:
1. RepeatMasker: For the identification and classification of low-complexity regions (result: 193,751 features).
2. SSR finder: For the localization of Simple Sequence Repeats (SSRs) or microsatellites (result: 167,882 features).
3. getorf: For the prediction of potential Open Reading Frames (ORFs) (result: 13,493,413 features).
The resulting comprehensive annotated loci files are valuable resources and are now available to the interested community for downstream genomic analysis.