Characterizing multidimensional cellular physiological states with quantitative three-dimensional shape descriptors for cell membranes

Supplementary dataset and code for the article "Characterizing Cellular Physiological States with Three-Dimensional Shape Descriptors for Cell Membranes"

CShaper Dataset.zip: The 3D cell regions reused from the previously published article https://doi.org/10.1038/s41467-020-19863-x.

Cell Shape Descriptors - Code & Data.zip: The code (exemplifed by embryo Sample04) and data (including embryo Sample04-Sample20) of 12 3D shape descriptors for all 3D cell regions in the CShaper dataset.

GUI.zip: The user-friendly software Shape Descriptor Tool is a Graphical User Interface based on Matlab for calculating 12 shape descriptors for a 3D cell region (exemplified by embryo Sample20, time point 14, ABpl cell in the CShaper dataset). The instruction guidebook is included in the Supplementary Material of the article.