Genotypic data on reference set for fodder quality in Sorghum under drought
收藏DataCite Commons2021-11-25 更新2024-07-13 收录
下载链接：
http://dataverse.icrisat.org/citation?persistentId=doi:10.21421/D2/ERBXEH
下载链接
链接失效反馈官方服务：
资源简介：
Genotypic data on 129 reference entries of Sorghum for GWAS analysis and identification of genomic regions for fodder quality. The genotypes were sown and DNA was isolated from leaves of each accession at 4 to 6 leaf stage using the modified hexadecyltrimethylammonium bromide (CTAB) protocol from 12-day-old seedlings and genotyping done following the GBS (Genotyping by Sequencing) approach with ApeKI restriction enzyme used for complexity reduction. SNPs were called using TASSEL v5.2 GBS pipeline against Sorghum assembly v3.1 with default parameters. The raw SNP data has 129 taxa with 5176699 numbers of sites. The filtering was done with site coverage of 80%, minimum allelic frequency: 0.01, heterozygosity: 50% and a final SNP count of 11472.
提供机构：
ICRISAT Dataverse
创建时间：
2021-11-25
