Genome-wide localization profile (ChIP-seq) and differential expression profile upon RNAi treatment (RNA-seq) of L(3)mbt and its interactor in ovarian somatic cells[OSCs] in Drosophila

L(3)mbt regulate the transcription of germ-specific genes in somatic cells but the detailed mechanism remains unclear. We performed ChIP-seq of L(3)mbt and a newly identified interactor in OSCs to elucidate the genome-wide localization. Then we performed RNA-seq of OSCs before and after RNAi treatment of L(3)mbt and its interactors and performed differential expression analysis. ChIP-seq of OSCs were performed in duplicate and RNA-seq of OSCs before and after RNAi treatment of L(3)mbt and its interactor were performed in triplicate.