Samples 64 FFPE samples were provided as unstained and H&E slides. Macrodissection was performed if indicated on the slide. Macrodissection is indicated in the "Samples" tab. Macrodissection marks wer
Additional file 8:St_2c_167_common_contigs.bed. BED file containing chromosome postion, start, end and common_contig_ID for c167 experiment (Experiment 3). Format BED. View with Wordpad. (BED 759 KB)
Comparison of DEGs obtained from individual pipelines for the Blekhman’s count data. Sheet 1: Numbers of DEGs satisfying the 5 % FDR threshold and the overlaps between all pairs of pipelines are shown
Table S7. Tabulation of 650 loci of Bombyx mori genone whose transcript abundance in PG cells was used to determine the genes expressed in these cells. Data from Bowtie2 (column F and G) [27, 28] and