The regulatory landscape of the yeast phosphoproteome

Supplementary Table 1: Treatment, sample preparation and measurement information for all analyzed samples.
Supplementary Table 2: Ultra-deep reference yeast phosphoproteome.
Supplementary Table 3: Complete and not batch corrected, quantitative phosphosite datasets.
Supplementary Table 4: Proteome quantitation of 30 selected perturbations and differential expression of proteins versus untreated.
Supplementary Table 5: Batch corrected quantitative core phosphoproteome dataset.
Supplementary Table 6: Differential expression of phosphosites in all perturbations versus the untreated control.
Supplementary Table 7: Perturbation-specific phosphosites.
Supplementary Table 8: Phosphosites associated with TOR subnetworks.
Supplementary Table 9: Catalog of characterized, co-regulated phosphosites, assembled in modules.