Additional file 1 of Primary transcriptomes of Mycobacterium avium subsp. paratuberculosis reveal proprietary pathways in tissue and macrophages

Additional file 1: MAP identified genes in ileum, mesenteric lymph node and in vitro infected bovine macrophages. Fold changes, putative functions and regulation of MAP genes uniquely identified and shared in the ileum, mesenteric lymph node and in vitro infected bovine macrophages. Tables: S1-S9. S1: Ileum specific MAP genes. S2: Mesenteric lymph node specific MAP genes. S3: Ileum and Mesenteric lymph node shared MAP genes. S4: Macrophage specific MAP genes (6 and 48 hrs PI). S5: Macrophage specific MAP genes (6 and 120 hrs PI). S6: Macrophage specific MAP genes (48 and 120 hrs PI). S7: Common MAP genes between natural and in vitro infection. S8: Expression of MAP lineage specific LSPs in the tissues of naturally infected cattle. S9: Expression of MAP lineage specific LSPs in the in vitro infected macrophages. (XLS 120 KB)