Additional file 2 of Disinfection exhibits systematic impacts on the drinking water microbiome

Additional file 2:Table S11. Summary statistics for metagenome assembled genomes (MAGs) extracted from the metagenome assemblies. Metagenome assembled genomes (MAG) were finalized after dereplication using dRep (https://github.com/MrOlm/drep) using all MAGs assembled in this study. As a result, the name assigned to a MAG does not represent sampling location it was assembled from. MAGs were assigned taxonomy using the Genome taxonomy database (GTDBTK: https://gtdb.ecogenomic.org/) version 0.1.3. The completeness and redundancy of MAGs was estimated using CheckM (https://github.com/Ecogenomics/CheckM/wiki) version 1.0.7. Only MAGs >50% completeness and <10% redundancy were included in the study. The genome statistics were estimated using Prokka. The coding density was estimated by dividing the cumulative length of coding sequences (CDS) divided by the length of the MAG. The MAGs were assigned four categories, "D-only", "ND-only", "Both", and "Other". "D-only" was assigned to MAGs detected in >20% of disinfected samples and not detected in non-disinfected samples. "ND-only" was assigned to MAGs detected in <20% of disinfected samples and not detected of non-disinfected samples. "Both" was assigned to MAGs that were detected in >20% of disinfected and non-disinfected samples. "Other" was assigned to MAGs that did not fall in either of the above three classes. (see excel spreadsheet).