Pesticide risk during commercial apple pollination is greater for honeybees than other managed and wild bees

Data and code relating to the manuscript “Pesticide risk during commercial apple pollination is greater for honeybees than other managed and wild bees”

Files are organized as follows

input - contains the main data files.

all_pesticide2019.csv – contains the pesticide residue data for all samples

LD50.csv – contains pesticide LD50s in PPB

ld50_per_bee.csv – contains pesticide LD50s in ug / honeybee

nesting_type.csv – lists nesting types of the different bee samples

pesticide_type.csv – lists pesticides by their type

short_name.csv – lists short bee names

folder “gis”

hive_distance_matrix.csv – distances from each orchard to other sites

sitelocation.csv – contains coordinates of sites

code - contains the scripts to analyze the input files

pesticide_analysis.R – is the main anaylsis for the paper

unadjusted_pesticide_analysis.R – is a copy of most of the code above but without LD50 weight adjustements

ld50 adjust - contains the inputs and code for the ld50 adjustments I ran

ld50_adjust.R – is the code to calculate our the adjustements

2020_BeeTox_database_acute_contact_publication_final_R1.csv – is the data file taken from pamminger publication