Pug dog thoracolumbar myelopathy
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The datasets consist of genotype data from pug dogs in plink format used for the study <strong>Multiple genetic loci associated with pug dog thoracolumbar myelopathy.</strong> <br> PDM plink files are QC:ed (--maf 0.01 --geno 0.05 --mind 0.05 and --hwe 1e-10) and relatedness filtered at a threshold of 0.177, including 89 dogs of which 51 were affected by pug dog thoracolumbar myelopathy and 38 were unaffected controls. <br> Genotyping technique is indicated in the FIID column, with GC indicating Gencove low-pass sequenced dogs using Pipeline Dog low pass v2 with 676 dogs in the reference panel and GW indicating genotyped dogs using Illumina 230k CanineHD BeadChip. <br> Chromosomal coordinates are based on the dog CanFam3.1 genome assembly.
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Uppsala University创建时间：
2023-01-28
