Supporting data for: A comparative analysis of planarian genomes reveals regulatory conservation in the face of rapid structural divergence

This upload contains genome assemblies and annotation files for four planarian species. Genome assemblies The genome assemblies are deposited as FASTA files with the ending '.fa.gz'. Genome annotations The genome annotations are deposited as gff3 files and contain the 'ENCODE' keyword. Integration into Wormbase are currently ongoing to provide userfriendly access. Transposable element annotation Transposable element annotation performed with the EDTA pipeline are deposited as GFF3 files with the file ending '.EDTA.TEanno.gff3.gz'. Satellite DNA Repetitive satellite regions annotated using RepeatExplorer and SRF are deposited as GFF3 files with the ending 'satDNA.gff3'.