Core genome phylogenetic tree of two Campylobacter novaezeelandiae and four unclassified thermophilic Campylobacter isolates from Canadian agricultural surface water
收藏DataCite Commons2025-05-01 更新2025-05-10 收录
下载链接：
https://datadryad.org/dataset/doi:10.5061/dryad.qrfj6q5f2
下载链接
链接失效反馈官方服务：
资源简介：
This dataset includes 1) concatenated alignment of 135 core gene
sequences and 2) phylogenomic tree of the 38 currently described
Campylobacter spp., including Campylobacter novaezeelandiae and four
additional novel Campylobacter species isolated from agricultural water in
Canada. The original alignment of 120 kb was produced by
Roary v.3.13.0. Gblocks v.0.91b was used to
remove ambiguous alignments and phylogenetically uninformative positions.
The final alignment (110 kb) was used as input to RAxML-NG
v.0.9.0 to infer a phylogenetic tree under the GTR+G substitution model
with 100 bootstrap replicates.
提供机构：
Dryad
创建时间：
2021-02-16
