Data from: Long-term evolution of the natural isolate of Escherichia coli 536 in the mouse gut colonized after maternal transmission reveals convergence in the constitutive expression of the lactose operon.

Mothers_fastq_files_E.colifastq files corresponding to the sequences of Escherichia coli 536 strains extracted from 13 mothers at day 16. Please see README file ' Mothers_fastq_files_E.coli-README.txt ' for additional information.CD_offsprings_fastq_files_E.colifastq files corresponding to the sequences of Escherichia coli 536 strains extracted from offsprings fed with a regular diet. Please see README file 'CD_offsprings_fastq_files_E.coli-README.txt' for additional information.WD_offsprings_fastq_files_E.colifastq files corresponding to the sequences of Escherichia coli 536 strains extracted from offsprings fed with a high fat high sugar diet. Please see README file 'WD_offsprings_fastq_files_E.coli-README.txt' for additional information.E. coli 536 reference (gbk file)gbk file of the reference of E. coli 536 used for the analysis of the mutations by the software breseqE_coli_536_ref_breseq.gbkMothers_fastq_files_E.coli_day_1fastq files corresponding to the sequences of Escherichia coli 536 population extracted from 4 mothers (Mo4, Mo5, Mo11 and Mo12) at day 1. Please see README file ' Mothers_fastq_files_E.coli_day1_README.txt ' for additional information.Mothers_fastq_files_E.coli_lacI_instability_after_maternally_microbiota_transmission_day_1.tar.gz