Vicugna pacos (Alpaca Mar. 2013 Vicugna_pacos-2.0.1)

High scoring set 1284 tRNAs decoding standard 20 AA 1283 Selenocysteine tRNAs (TCA) 1 Notable atypical predictions Anticodon/isotype mismatch 355 Unexpected anticodons 44 Non-canonical anticodon loop length 77 Other tRNA-like predictions Primary filter (tRNAscan-SE pseudogenes) 33156 Secondary filter (low feature scores, possible rep. element) 29723 Tertiary filter (excessive isotype copies, possible rep. element) 12730 Ala AGC 2 Arg TCT 4 Leu CAA 6 Ile TAT 5 Tyr GTA 12 Isotype tRNA Count by Anticodon Total Ala AGC 905 GGC CGC 17 TGC 19 941 Gly ACC GCC 10 CCC 6 TCC 5 21 Pro AGG 10 GGG CGG 4 TGG 6 20 Thr AGT 9 GGT CGT 3 TGT 3 15 Val AAC 8 GAC CAC 8 TAC 5 21 Isotype tRNA Count by Anticodon Total Ser AGA 13 GGA CGA 4 TGA 4 ACT GCT 11 32 Arg ACG 10 GCG CCG 4 TCG 6 CCT 7 TCT 5 32 Leu AAG 7 GAG CAG 4 TAG 4 CAA 6 TAA 3 24 Isotype tRNA Count by Anticodon Total Phe AAA GAA 11 11 Asn ATT GTT 12 12 Lys CTT 15 TTT 12 27 Asp ATC GTC 8 8 Glu CTC 5 TTC 7 12 His ATG GTG 8 8 Gln CTG 10 TTG 5 15 Isotype tRNA Count by Anticodon Total Ile AAT 12 GAT CAT TAT 5 17 iMet/Met CAT 11/11 22 Tyr ATA GTA 12 12 Supres TCA CTA TTA 0 Cys ACA GCA 25 25 Trp CCA 8 8 SelCys TCA 1 1