five

Distance models

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Figshare2024-11-22 更新2026-04-28 收录
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This folder contains:the plant-insect interactions recorded for the three time points of April (1), June (2) and August (3) 2016, from which we calculated the Horn-Morisita niche dissimilarity indices.the insect virus normalized read numbers matrices between our focal 5 bee species (Apis mellifera, Bombus terrestris, Bombus lapidarius, Bombus hortorum and Bombus pascuorum), from which we calculated the virome dissimilarity indices for the three time points. VirINS files for insect viruses, number 1 for April, 2 for June, 3 for August.the plant virus normalized read numbers matrices between our focal 5 bee species (Apis mellifera, Bombus terrestris, Bombus lapidarius, Bombus hortorum and Bombus pascuorum), from which we calculated the virome dissimilarity indices for the three time points. VirPLANT files for insect viruses, number 1 for April, 2 for June, 3 for August.the mitochondrial gene COI sequence alignment for the 5 bee species.the R script used to test the effect of host ecological niche dissimilarity (Horn-Morisita), the host phylogenetic distance (using DNADist method to calculate the nucleotide distance between aligned sequences) and phenology (time points) on virome dissimilarity.
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2024-11-22
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