Supplementary data - "Learning Reduced Models for Large-Scale Agent-Based Systems"

This repository contains supplementary data on my PhD thesis "Learning Reduced Models for Large-Scale Agent-Based Systems". Chapters 1-3, 7 and A do not have supplementary data. <strong>Chapter 4</strong> <em>Large_deviation_example.zip</em> contains the trajectory for Figure 4.8. <em>mean_exit_time*</em> contains the raw data to compute the mean exit time and standard deviation for the ABM process (JP) and SDE process (CLE). It contains additionally a precomputed mean and standard deviation as well as the corresponding numbers of agents. <em>transition_matrix*</em> contain the computed box discretizations as MATLAB and Numpy files as used for Figures 4.2-4.4, 4.6 and Tables 4.1 and 4.2. <strong>Chapter 5</strong> <em>CVM_2021-07-09-15-53_training_data.npz</em> contains the training data for Figure 5.7 a and b. <em>CVM_2021-09-29-07-13_distribution.npz </em>contains the raw data for Figure 5.7 c. The remaining data for Chapter 5 can be found in the related dataset doi.org/10.5281/zenodo.4522119. <strong>Chapter 6</strong> <em>CVM_pareto_estimate</em> contains trajectory data required for Figure 6.6 b to estimate points in the Pareto Front using the civil violence model. <em>CVM_training_data</em> contains the training data to construct the surrogate model. Each data set consists of <em>CVM_*_cops_train.npz</em> as training set, <em>CVM_*_cops_trajectory.npz</em> as sample trajectory and <em>CVM_*_cops.pkl</em> to compute the training data. <em>CVM_covering_iterations_8.mat</em> Pareto set covering after 8 iterations for the civil violence model. Required for Figure 6.6 a. <em>CVM_pareto_set+front.npz</em> is required for Figure 6.6 b. <em>CVM_surrogate_model.mat</em> contains the surrogate model for the civil violence model <em>Expl_iterations_*</em> contains Pareto set coverings after 8 and 12 iterations for Example 6.1.4 and Figure 6.1. <em>VM_covering_iterations_12.mat</em> contains the Pareto set covering depicted in Figure 6.4 a. <em>VM_ODE_covering_iterations_12_subset_front.mat</em> contains the Pareto set covering depicted in Figure 6.5 and 6.5 c. <em>VM_ODE_covering_iterations_12_subset.mat</em> contains the Pareto set covering depicted in Figure 6.5 and 6.5 d. <em>VM_ODE_covering_iterations_12.mat</em> contains the Pareto set covering depicted in Figure 6.4 b. <em>VM_surrogate_model.mat</em> contains the surrogate model for the extended voter model. <em>VM_test_points_non_pareto.npz</em> contains Non-Pareto points in Figure 6.5 and 6.5 d. <em>VM_test_points_pareto.npz</em> contains Pareto points in Figure 6.5 and 6.5 c.