ena-DATASET-IC-07-11-2017-14:25:52:194-272 - samples
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https://www.omicsdi.org/dataset/ega/EGAD00001003803
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资源简介:
This dataset contains VCF files from a variant calling analysis of 19 neuroblastoma patients.
WES or WGS data of the primary tumor were compared to WES cfDNA analysis at the time of diagnosis and at a 2nd timepoint (complete remission, partial remission, disease progression or relapse). For 4 patients, WGS of germline, tumor at diagnosis and tumor at relapse DNA was performed on Illumina HiSeq2500, with 100-bp paired-end reads. For the other patients, WES was performed using either an AgilentSureSelect Human All Exon v5 or a Roche Nimblegen SeqCap EZ Exome V3 kit on Illumina HiSeq2000, with 100-bp paired-end reads.
SNVs observed in any of the primary tumors or cfDNA samples studied by WES were targeted using a capture sequencing panel at all intermediate time points.EGA dataset EGAD00001003803
创建时间:
2019-10-01



