Molecular evidence for introgressive hybridization in New Zealand masked gulls

Genetic data and codes to reproduce the analyses from the manuscript :

Given, A. D., Mills, J. A., Momigliano, P., & Baker, A. J. (2022). Molecular evidence for introgressive hybridization in New Zealand masked gulls. Ibis. https://doi.org/10.1111/ibi.13117

The data and codes are  in  two zipped folders

FSC.zip

PopGen.zip

The FSC.zip folder contains data and scripts to reproduce the fastsimcoal simulations and to calculate summary statistics from observed and simulated data. It also includes the results from these analyses and an R script to run ABC model selection via random forest.  

The PopGen.zip folder contains the microsatellite dataset in both genepop (RB-BB.gen) and structure (RB-BB.str) formats , the results from STRUCTURE analyses (folder RB-BB_STRUCT), and an R script (Popgen_analyses.r) to reproduce population genetic analyses (PCA and summary statistics: FST, and estimate HWE,  HO and HE) and plots.