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Expression profile of Pseudomonas aeruginosa ÎgcsR PAO1 using RNA-Seq

ChEBI2016-01-08 更新2026-07-12 收录

病原体转录组

细菌基因调控

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-76522 数据链接链接失效反馈

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资源简介：

Expression profile of Pseudomonas aeruginosa ÎgcsR PAO1 using RNA-Seq

应用场景：

创建时间：

2016-01-08

细菌基因调控

核酸结构与功能分析

Sigma factors are an important class of bacterial transcription factors that lend specificity to RNA polymerases by binding to distinct promoter elements for genes in their regulons. Here we show that

NIAID Data Ecosystem90

High-confidence CRP binding sites on the ETEC H10407 chromosome identified by ChIP-seq.

转录因子结合位点

细菌基因调控

aChomosome coordinate of the ChIP-seq peak in H10407. Underlined text indicates that the ChIP-seq peak maps to sequence that is not conserved in E. coli K-12. bCRP binding site sequence predicted by M

NIAID Data Ecosystem60

Analysis of Listeria monocytogenes VirR regulon. Listeria monocytogenes

细菌基因调控

单核细胞增生李斯特菌

by comparing WT strain vs a delta-VirR strain, we complete the analysis of VirR regulon, and we show that virR induces the expression of a small RNA Overall design: WT EGDe Lmo grown in BHI vs delta-v

NIAID Data Ecosystem30

Volcano plot of Sigma B-dependent differential gene expression of Clostridioides difficile

细菌基因调控

转录组学分析

A customized whole-genome DNA microarray of Clostridioides difficile 630∆erm was used (8x15K format, Agilent). Quadruplicate samples were analysed for the DNA microarray. Using the ULS fluorescent lab

NIAID Data Ecosystem70

Additional file 1 of RpoN1 (sigma factor 54) contributes to the virulence of Paracidovorax citrulli by regulating the expression of type IV pili PilA

植物病原菌毒力

细菌基因调控

Additional file 1.

NIAID Data Ecosystem30