遇见数据集

Test data for HERRO

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Zenodo2024-11-07 更新2026-05-26 收录
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Some read data that can be used for a test run of HERRO. e.g. herro inference -t 4 -m model -d 2,3 -b 32 HG002.chr19_10M_12M.fastq.gz output.fasta The data is a part of the data from https://s3-us-west-2.amazonaws.com/human-pangenomics/index.html?prefix=submissions/5b73fa0e-658a-4248-b2b8-cd16155bc157--UCSC_GIAB_R1041_nanopore/HG002_R1041_UL/dorado/v0.4.0_wMods/ , preprocessed with adaptor trimming/splitting and filtered to at least 10000bp and Q10, and contains reads (~40x) that are aligned to 10-12Mbp of chr19 maternal/paternal of HG002 v1.0.1 assembly from https://github.com/marbl/HG002

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Zenodo
创建时间:
2024-11-07
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