spotless-benchmark-datasets

In standards.tar.gz, the silver standards are formatted as silver_standard_i-j, where i refers to the originating single-cell dataset and j refers to the synthspot abundance pattern. Each directory of the silver standard contains 10 replicates. All reference datasets are in the 'reference/' folder. Single-cell dataset: Brain cortex Single-cell cerebellum Single-nucleus cerebellum Hippocampus Kidney Squamous cell carcinoma Melanoma Abundance patterns: Uniform distinct Diverse distinct Uniform overlap Diverse overlap Dominant cell type Partially dominant cell type Rare cell type Regionally rare cell type Missing cell types To use liver_dataset.tar.gz, please read liver_README.txt before proceeding. We only uploaded .rds files to keep the file size smaller. For more information on file conversion, please visit the GitHub repository.