Prostate_cancer_cross-platform_results

Cross-platform integrative analysis results from biological comparisons performed between various prostate cancer stages presented in "The Transcriptomic Landscape of Prostate Cancer Development and Progression: An Integrative Analysis" study. Data were integrated using our integrative pipeline available at https://github.com/JMarzec/transcriptomics_data_integration.Biological comparison:TvsN - results from Primary tumour (T) versus Benign prostate (N) comparisonHvsN - results from HGPIN (T) versus Benign prostate (N) comparisonTvsH - results from Primary tumour (T) versus HGPIN (H) comparisonTmvsT - results from Metastatic primary tumour (Tm) versus Primary tumour (T) comparisonMvsT - results from Metastasis (M) versus Primary tumour (T) comparisonResults description:ensembl_id - Ensembl gene IDhgnc_symbol - HGNC gene symboldescription - HGNC gene namechromosome_name - gene chromosomal location (chromosome name)band - gene chromosomal location (chromosome band)strand - gene chromosomal location (chromosome strand)start_position - gene start location (base pair position)end_position - gene end location (base pair position)rank_[biological_comparison] - data integration-based gene ranking in individual biological comparisonsrank_[biological_comparison]_percentile - data integration-based gene ranking (percentile) in individual biological comparisonsaverage_log2fc_[biological_comparison] - expression fold-changes (in log2 scale) observed in individual biological comparisonscombined_p_[biological_comparison] - combined P-values observed in individual biological comparisons