RNA-seq analysis of Eriocheir sinensis muscle

the chromatin accessibility and gene expression of muscle in E. sinensis in pre-molt (D) and post-molt (A) stages were sequenced by Assay of Transposase Accessible Chromatin sequencing (ATAC-seq) and RNA-seq, respectively.The differntial peaks in ATAC-seq and differntial genes in RNA-seq were analzed. The data was used to analysis the differentially expressed genes (DEGs) in muscle before and after molting by combining ATAC-seq and RNA-seq Muscle of healthy crabs in pre-molt (D stages) and post molt (A stages) were collected and used for ATAC-seq and RNA-seq analysis.in each stages, three muscle samples were collected as the experimental replications. RNA-seq was performed with Illumina novaseq platform with E. sinensis genome (accession number PRJNA555707) as the reference genome.