Ex vivo modelling of human colorectal cancer liver metastasis using normothermic machine perfusion

This archive contains input data, environment yml files as well as all results related to the single-cell RNA-seq analysis from the paper: Trebo, Maurer, Krendl, Salcher, et al. (2025). Ex vivo modelling of human colorectal cancer liver metastasis using normothermic machine perfusion In particular, it contains the following files data.zip: h5ad file with processed scRNA-seq and ST data Analysis.zip: executed jupyter notebooks as html to recapitulate analysis steps environments.zip: YAML files for the conda environments used for Analysis