OTU table
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https://figshare.com/articles/dataset/OTU_table/7551026
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资源简介:
Number of sequences of each Operational Taxonomic Units (OTUs) recovered from stomach content analysis of Chromis viridis (n=27), Dascyllus flavicaudus (n=34) and Pocillopora eydouxi (n=3) using metabarcoding sequencing of the mitochondrial Cytochrome c Oxidase Subunit I (COI).
Column "Source ID": An OTU was considered to match a reference sequence in the Moorea BIOCODE database, GenBank or BOLD if the level of similarity was higher than 97% (BIOCODE: >97% similarity to BIOCODE reference barcode; Match: >97% similarity to GenBank or BOLD reference barcode). OTUs with <97% similarity to reference COI barcodes were assigned (and labeled as "Assigned" in Column "Source ID") to phyla using a Bayesian phylogenetic approach implemented in the Statistical Assignment Package (SAP) and closest Blast hits (if >85% similarity, see Methods section). OTUs that could not be confidently assigned using any of the methods above were labelled “NoMatch”.
创建时间:
2019-01-07



