Differential DNA methylation model metrics.

The table gives metrics (first column) for four different models, as well as a combined model, (top row and described in the text). The column labeled ‘Total / optimal value’ gives the maximum or best value achievable for each metric. The column labeled ‘WGBS differential DNA methylation’ provides coverage information for comparison purposes. *Note: In the case methylation levels, only CpG dimers with 5X coverage in both EARLY intermediates and ESCs were considered. With respect to counts, CpG dimes with 2+ reads in the surrounding 1Kb bin, in at least one sample, were considered. Red intensity signifies how close the metrics are to the optimal values.