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Additional file 2 of Distinctive signatures of pathogenic and antibiotic resistant potentials in the hadal microbiome

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DataCite Commons2024-02-14 更新2024-08-26 收录
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https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Distinctive_signatures_of_pathogenic_and_antibiotic_resistant_potentials_in_the_hadal_microbiome/19654501
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Additional file 2. Datasets S1: metagenomic data information. Dataset S2: key words which were used to extract the hmm models to construct the ARGfams from Pfam (v 30.0) and TIGRFAMs. Dataset S3: ARG types and subtypes' information of domain based annotation result. Dataset S4: MGE types and subtypes' information. Dataset S5: The number of toxin genes predicted from the sediment metagenomes based on DBETH. Dataset S6: The number of toxin genes predicted from the sediment metagenomes based on VFDB. Dataset S7: Relative abundance of known ARGs in the sediment metagenomes based on ARGs-OAP v2.0 pipeline analysis. Unit: copies per 16S rRNA gene copy (GP16S). Dataset S8: Number and distribution of MGEs genes predicted from the sediment metagenomes based on MGEfams. Dataset S9: Number of ARGs predicted from the sediment metagenomes based on ARGfams.
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figshare
创建时间:
2022-04-26
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