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(16s) No 1. DADA2 Workflow (16S rRNA) Output

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NIAID Data Ecosystem2026-03-12 收录
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https://figshare.com/articles/dataset/No_2_DADA2_Workflow/12403865
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资源简介:
Output files from the No 1. DADA2 Workflow page of the Bocas Hypoxia study. File names and descriptions: RUN01_read_changes.txt: Tracking changes in read counts (per sample) from the beginning to end of the DADA2 workflow. RUN02_read_changes.txt: Tracking changes in read counts (per sample) from the beginning to end of the DADA2 workflow. combo_pipeline.rdata: contains sequence and taxonomy tables from the DADA2 pipeline needed for subsequent analyses. To see the Objects, in R run load("combo_pipeline.rdata", verbose=TRUE) 1) seqtab.1: Sequence table from Run01 before merging with Run02.2) seqtab.1: Sequence table from Run02 before merging with Run01.3) st.sum: merged sequence table before removing chimeras4) st.all: duplicate of st.sum5) seqtab: merged sequence table after removing chimeras6) tax_silva: Silva (v132) taxonomy table of seqtab7) tax_gg: GreenGenes taxonomy table of seqtab
创建时间:
2020-06-01
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