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Pacific Ocean Viral Line P metagenomes with depth, temperature and oxygen from CCGS John P. Tully JPT_2009-03, JPT_2009-09, JPT_2009-10 along Line P, eastern N. Pacific off British Columbia from Jan.-Aug.2009 (ENP viral community project)

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DataONE2017-09-21 更新2024-06-26 收录
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<p>This dataset includes metadata for virus metagenome samples from the Line P transect, an&nbsp;Eastern North Pacific Ocean transect from Vancouver to Ocean Station Papa sampling at 10 to 2000 meters at stations P4 (48 N, 126W), P12 (48N, 130W), and P26 (50N, 144W).</p> <p>All metagenomic sequences used in the analysis are available at CAMERA under the project accessions: CAM_P_0000915.&nbsp;<a href=\"http://camera.crbs.ucsd.edu/projects/details.php?id=CAM_P_0000915\" target=\"_blank\">http://camera.crbs.ucsd.edu/projects/details.php?id=CAM_P_0000915</a> \"Pacific Ocean Virus (POV) Protein Clusters.</p> <p><strong>Relevant References:</strong></p> <p>Hurwitz, B.L., &amp; Sullivan, M.B. (2013). The Pacific Ocean Virome (POV): A marine viral metagenomic dataset and associated protein clusters for quantitative viral ecology. PLoS One. 8(2), e57355. doi:<a href=\"http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0057355#pone-0057355-t002\" target=\"_blank\">10.1371/journal.pone.0057355</a>.</p> <p>Hurwitz, B.L., Hallam, S.J., &amp; Sullivan, M.B. (2013). Metabolic reprogramming by viruses in the sunlit and dark ocean. Genome Biol. 14:R123. doi:<a href=\"http://genomebiology.com/2013/14/11/R123\" target=\"_blank\">10.1186/gb-2013-14-11-r123</a>.&nbsp;</p> <p>Hurwitz, B.L., Brum, J.R., &amp; Sullivan, M.B. (2014). Depth-stratified functional and taxonomic niche specialization in the ‘core’ and ‘flexible’ Pacific Ocean Virome. ISME J. <a href=\"http://www.nature.com/ismej/journal/vaop/ncurrent/full/ismej2014143a.html\" target=\"_blank\">doi:10.1038/ismej.2014.143</a>.&nbsp;</p> <p>Hurwitz, B.L., Westveld, A.H., Brum, J.R., &amp; Sullivan, M.B. (2014). Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses. PNAS. <a href=\"http://www.pnas.org/content/111/29/10714.full\" target=\"_blank\">doi:10.1073/pnas.1319778111</a>.&nbsp;</p>
创建时间:
2021-12-05
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