相关数据集
The Jukes-Cantor Model and Phylogenetic Invariants
In this presentation, I explored the Jukes-Cantor model (JC69), a foundational model in molecular evolution that assumes equal mutation rates among all four nucleotides. Under the supervision of Prof.
Figshare2025-05-11 更新80
Golden posterior tree sets and XMLs from DS1
Two independent posteriors of 1 million samples for DS1, including the xml files. You can unpack the tar.gz after it is downloaded.
DataCite Commons2024-08-26 更新50
Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model
The reconstruction of the Tree of Life has relied almost entirely on concatenation methods, which do not accommodate gene tree heterogeneity, a property that simulations and theory have identified as
DataONE2020-06-24 更新40
betaflexi_MAFFT.fas.iqtree
Report (text format) from the tree reconstruction using the best-fit model (TIM3+F+I+G4) identified by ModelFinder in IQTREE v. 2.2.0. Contains the resulting trees
Recherche Data Gouv France2023-01-01 更新60
Long Branch Effects Distort Maximum Likelihood Phylogenies in Simulations Despite Selection of the Correct Model
The aim of our study was to test the robustness and efficiency of maximum likelihood with respect to different long branch effects on multiple-taxon trees. We simulated data of different alignment len
NIAID Data Ecosystem50
