A map of integrated cis-regulatory elements enhances gene regulatory analysis in maize

Dataset S1. Genomic coordinates of the conserved non-coding sequence datasets (BLSSpeller, msa_pipeline, funTFBS, Song-2021, and Conservatory), accessible chromatin region compendium (ACR), unmethylated regions (UMR), and the iCREs (both the “all iCREs” and “max F1 iCREs”) constructed from them. All datasets are available both in version 4 and 5 of the maize genome. Dataset S2. Edge list files of all gene regulatory networks constructed for this study. Dataset S3. Gene ontology enrichment output of “all iCRE”-based gene regulatory networks. Supplementary Tables