Single cell RNA sequencing of lung cells in healthy and hyperglycemic mice infected with influenza virus

We performed single cell RNAseq to measure gene expression in different subsets of lung cells over the course of influenza infection to understand the effect of hyperglycaemia on the response to infection. Akita mice were used to model hyperglycaemia. We have collected samples at 3 time points before infection, one day after infection and 10 days after infection.