Protein Structure Predictions for Basler et al: A comprehensive catalogue of phages in the honey bee gut microbiome

83306 protein structure predictions (ColabFold/AlphaFold2) with .pdb structures, pae JSON and pLDDT JSON outputs from ColabFold as part of Basler et al: A comprehensive catalogue of phages in the honey bee gut microbiome, used with Phold The tarball contains 3 subdirectories and one TSV file: renamed_pae_jsons: contains ColabFold/AlphaFold2 pae JSON files for each structure prediction renamed_jsons: contains ColabFold/AlphaFold2 plddt JSON files for each structure prediction renamed_pdbs: contains ColabFold/AlphaFold2 .pdb structure prediction files plddt_ptm_len.tsv: 5 column TSV containing (for each protein in the Pharokka annotations) protein name length (AA) folded (all True) - redundant column mean_plddt - mean AlphaFold2 pLDDT across the whole protein ptm (AlphaFold2) This file is also available in the main repository Note that for easier Zenodo upload file size uploads, I split the tarball into 1GB chunks suffixed _partaa _partab etc. To recombine and extract: cat basler_output_renamed.tar.gz_part* > basler_output_renamed.tar.gz tar -xzf basler_output_renamed.tar.gz For validation, the md5sum of the overall tarball is 747e994bbfd9e07250420724e10ebe2d