Additional file 2 of Mutation of amphioxus Pdx and Cdx demonstrates conserved roles for ParaHox genes in gut, anus and tail patterning

Additional file 2: Supplementary Data. Gene expression differences between mutant and wild type amphioxus inferred from mapping RNAseq reads to superTranscriptome. Contig identity, expression fold change, FPKM, raw read counts and DNA sequence are given for Cdx gene mutation analysis (42 h dataset; 34 h and 42 h datasets) and Pdx mutation analysis. Data underlying identification of gut-enriched genes in B. lanceolatum, inference of inferred B. floridae orthologues, presence in Pdx and Cdx differential gene expression datasets and putative gene identities.