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Long-range chromatin interactions in mouse embryonic stem cells identified by ChIA-PET [ChIA-PET]

ChEBI2014-06-27 更新2026-07-21 收录

三维基因组学

染色质构象

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-57911 数据链接链接失效反馈

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资源简介：

Long-range chromatin interactions in mouse embryonic stem cells identified by ChIA-PET [ChIA-PET]

应用场景：

创建时间：

2014-06-27

染色质构象

脂肪生成

ING1b and GADD45a are nuclear proteins involved in the regulation of cell growth, apoptosis and DNA repair. We previously found that ING1b is essential to target GADD45a-mediated active DNA-demethylat

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3D genomics across the tree of life reveals condensin II as a determinant of architecture type

三维基因组学

染色体结构

GAMinG script (python) and sequence file (.dat) to prepare files to run molecular dynamics in GROMACS (see ndb.rice.edu for more info regarding how to run the simulations). Two .hic maps and two sampl

NIAID Data Ecosystem50

ChIA-PET from GM19240 (ENCSR782XOF)

染色质构象

遗传学数据

H3K27ac ChIA-PET in GM19240 For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Use

NIAID Data Ecosystem30

Chromatin structure dynamics of hoxa13a, hoxa13b and hoxd13a loci during zebrafish development.

染色质构象

发育基因调控

We designed 4C-Seq experiments for hoxa13a, hoxa13b and hoxd13a promoters in three developmental stages in zebrafish embryos: 24, 48 and 60 hpf. 4C-seq samples for three different hox13 genes promoter

NIAID Data Ecosystem60

The embryo-larval and adult parts of the zebrafish major alpha/beta-globin gene locus are functionally and structurally independent. Danio rerio

染色质构象

珠蛋白基因表达调控

We have demonstrated that, in developing Danio rerio, the embryo-larval and adult subloci of the major globin locus acquire stage-specific hyperacetylation of histone H3 and that H3 hyperacetylation p

NIAID Data Ecosystem50

Long-range chromatin interactions in mouse embryonic stem cells identified by ChIA-PET [ChIA-PET]

资源简介：

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